Information for Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer (Motif 93)

A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
Reverse Opposite:
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G
p-value:
log p-value:-3.266e+03
FDR:0.000
Information Content per bp:1.717
Number of Target Sequences with motif
Percentage of Target Sequences with motif
Number of Background Sequences with motif
Percentage of Background Sequences with motif
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CAAAGGTCAG
CAAAGGTCAG
 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F2/MA1111.1/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CAAAGGTCAG-
CAAAGGTCAAA
 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CAAAGGTCAG
CAAAGKTCAA
 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CAAAGGTCAG---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CAAAGGTCAG
GKBCARAGGTCA-
 A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CAAAGGTCAG
NRBCARRGGTCA-
 A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CAAAGGTCAG---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CAAAGGTCAG
TCAAGGTCAN
 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGTCAG
NBYCAAGGTCAC
 A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CAAAGGTCAG-
TTAAAGGTCAAA
 A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A