Information for Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer (Motif 90)

G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
Reverse Opposite:
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T
p-value:1e-4065
log p-value:-9.361e+03
FDR:NA
Information Content per bp:1.688
Number of Target Sequences with motif15386.0
Percentage of Target Sequences with motif42.10%
Number of Background Sequences with motif4625.0
Percentage of Background Sequences with motif13.12%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ATTAACACCT
ATTAACACCT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:ATTAACACCT-
-TTVACACCTH
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T
A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:ATTAACACCT-
-TTMACACCTT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:ATTAACACCT-
TTTCACACCTN
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:ATTAACACCT
TTTCACACCT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:ATTAACACCT
TTTCACACCT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:ATTAACACCT
KTTCACACCT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX6/MA1567.1/Jaspar

Match Rank:8
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:ATTAACACCT-
-TTCACACCTN
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T
A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:ATTAACACCT-
-TTCACACCTT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:ATTAACACCT
--TCACACCT
 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T