Information for En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer (Motif 89)

T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
Reverse Opposite:
A T G C G A C T T G C A T C G A G C A T A C G T C T G A T A C G G A T C A G T C
p-value:1e-1116
log p-value:-2.571e+03
FDR:NA
Information Content per bp:1.540
Number of Target Sequences with motif11021.0
Percentage of Target Sequences with motif23.44%
Number of Background Sequences with motif5305.6
Percentage of Background Sequences with motif11.62%
Average Position of motif in Targets49.8 +/- 25.6bp
Average Position of motif in Background50.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NDCTAATTAS
NDCTAATTAS
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G

DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer

Match Rank:2
Score:0.99
Offset:2
Orientation:reverse strand
Alignment:NDCTAATTAS--
--STAATTANNN
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G A C G T A C G T
A C G T A C G T A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G T A C G T A G C

HOXA1/MA1495.1/Jaspar

Match Rank:3
Score:0.98
Offset:2
Orientation:forward strand
Alignment:NDCTAATTAS
--GTAATTAC
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A C G T A C G T A T C G A G C T T G C A C G T A A C G T A C G T C T G A A T G C

Lhx8/MA0705.1/Jaspar

Match Rank:4
Score:0.98
Offset:2
Orientation:forward strand
Alignment:NDCTAATTAS
--CTAATTAG
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:5
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NDCTAATTAS
NNYTAATTAR
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G

DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer

Match Rank:6
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NDCTAATTAS
NSNNTAATTA-
 A C G T T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T

HOXB5/MA0904.2/Jaspar

Match Rank:7
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NDCTAATTAS
--NTAATTAC
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A C G T A C G T T A C G A G C T T G C A C G T A A C G T A C G T C T G A A T G C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NDCTAATTAS
-NCTAATTA-
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T

dsc-1/MA0919.1/Jaspar

Match Rank:9
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NDCTAATTAS-
-ACTAATTAGT
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G A C G T
A C G T T C G A A G T C G A C T C T G A C T G A A G C T G A C T C T G A T C A G A G C T

EMX1/MA0612.2/Jaspar

Match Rank:10
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NDCTAATTAS
--CTAATTAN
 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G
A C G T A C G T A T G C A C G T G T C A C G T A A C G T A C G T C T G A T A C G