Information for EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer (Motif 77)

A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
Reverse Opposite:
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C
p-value:1e-1528
log p-value:-3.520e+03
FDR:NA
Information Content per bp:1.621
Number of Target Sequences with motif587.0
Percentage of Target Sequences with motif49.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets102.4 +/- 23.7bp
Average Position of motif in Background45.5 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
GGYAGCAYDTGCTDCCCNNN
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGYAGCAYDTGCTDCCCNNN
ADGGYAGYAGCATCT-------
 A C G T A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
---AGAAATGACTTCCCT--
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T

GCR2/MA0305.1/Jaspar

Match Rank:4
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
----------GCTTCCT---
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T A C G T A C G T

GCR2(MacIsaac)/Yeast

Match Rank:5
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
----------GCTTCCN---
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGYAGCAYDTGCTDCCCNNN
NNNTTAGGTAGCNTNT----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGYAGCAYDTGCTDCCCNNN
NNTGTAGGTAGCANNT----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGYAGCAYDTGCTDCCCNNN
-----CAGCTGTTTCCT---
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

NHLH2/MA1529.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGYAGCAYDTGCTDCCCNNN
GGGCCGCAGCTGCGTCCC---
 A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.52
Offset:11
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
-----------CTGCCCGCA
 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A