Information for E2F(E2F)/Hela-CellCycle-Expression/Homer (Motif 72)

A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
Reverse Opposite:
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A
p-value:
log p-value:-4.536e+01
FDR:0.000
Information Content per bp:1.718
Number of Target Sequences with motif
Percentage of Target Sequences with motif
Number of Background Sequences with motif
Percentage of Background Sequences with motif
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TTCGCGCGAAAA
TTCGCGCGAAAA
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

efl-1/MA0541.1/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TTCGCGCGAAAA-
CGCGCGCGCGAAATT
 A C G T A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T
G T A C C T A G G A T C C A T G T A G C T C A G T G A C A C T G A T G C T A C G G T C A T C G A C G T A G C A T A G C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TTCGCGCGAAAA-
-TGGCGGGAAAHB
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TTCGCGCGAAAA
--GGCGSGAAAW
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
A C G T A C G T T C A G C T A G G T A C C T A G T A C G A T C G C G T A C T G A C G T A C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TTCGCGCGAAAA
--GGCGGGAAAH
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

STB1(MacIsaac)/Yeast

Match Rank:6
Score:0.84
Offset:4
Orientation:forward strand
Alignment:TTCGCGCGAAAA
----CGCGAAAA
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
A C G T A C G T A C G T A C G T T A G C T C A G A T G C T A C G C T G A T C G A C T G A G C T A

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TTCGCGCGAAAA
TTTGGCGGGAAA-
 A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCGCGAAAA
TTTTGGCGGGAAAA
 A C G T A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TTCGCGCGAAAA--
TTTKSCGGSAAAAAH
 A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T
C G A T A C G T A C G T A C T G A T G C A T G C A T C G T A C G T A G C T G C A C G T A C G T A C G T A G C T A G A T C

SWI4(MacIsaac)/Yeast

Match Rank:10
Score:0.82
Offset:3
Orientation:forward strand
Alignment:TTCGCGCGAAAA
---ACGCGAAAA
 A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A
A C G T A C G T A C G T T G C A T G A C C T A G G A T C T A C G C T G A C T G A G T C A C T G A