Information for DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer (Motif 57)

A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A
Reverse Opposite:
G A C T T G C A G C T A G C A T A C G T T C G A A T G C T A C G
p-value:1e-1735
log p-value:-3.995e+03
FDR:NA
Information Content per bp:1.510
Number of Target Sequences with motif6511.0
Percentage of Target Sequences with motif22.74%
Number of Background Sequences with motif1702.5
Percentage of Background Sequences with motif6.43%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:SSTAATTA
SSTAATTA
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A
A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A

DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:SSTAATTA---
-STAATTANNN
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T A C G T A C G T
A C G T A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G T A C G T A G C

DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--SSTAATTA
NSNNTAATTA
 A C G T A C G T A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A
A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A

HOXC8/MA1505.1/Jaspar

Match Rank:4
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:SSTAATTA-
-GTAATTAC
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T
A C G T C A T G A G C T G T C A G T C A A C G T C A G T C T G A G T A C

LHX5/MA1519.1/Jaspar

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:SSTAATTA-
-GTAATTAA
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T
A C G T A T C G A G C T G T C A C G T A A C G T A G C T C T G A T G C A

HOXA1/MA1495.1/Jaspar

Match Rank:6
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:SSTAATTA-
-NTAATTAN
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T
A C G T T A C G A G C T T G C A C G T A A C G T A C G T C T G A T A G C

En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer

Match Rank:7
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:SSTAATTA---
-STAATTAGHN
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T A C G T A C G T
A C G T A T G C G A C T T G C A T C G A G C A T A C G T C T G A T A C G G A T C A G T C

en/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:SSTAATTA
--TAATTA
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A
A C G T A C G T G A C T G T C A C G T A A C G T A C G T C G T A

exex/MA0224.1/Jaspar

Match Rank:9
Score:0.96
Offset:1
Orientation:forward strand
Alignment:SSTAATTA
-GTAATTA
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A
A C G T A T C G A C G T C G T A C G T A A C G T G A C T C T G A

HOXB5/MA0904.2/Jaspar

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:SSTAATTA-
-GTAATTAC
 A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A A C G T
A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A A T G C