Information for DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer (Motif 55)

A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
Reverse Opposite:
A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G T A C G T A G C
p-value:1e-2432
log p-value:-5.602e+03
FDR:NA
Information Content per bp:1.511
Number of Target Sequences with motif11455.0
Percentage of Target Sequences with motif33.09%
Number of Background Sequences with motif3667.1
Percentage of Background Sequences with motif11.55%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNNTAATTAS
NNNTAATTAS
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G

En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer

Match Rank:2
Score:0.99
Offset:2
Orientation:reverse strand
Alignment:NNNTAATTAS--
--STAATTAGHN
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G A C G T A C G T
A C G T A C G T A T G C G A C T T G C A T C G A G C A T A C G T C T G A T A C G G A T C A G T C

DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NNNTAATTAS
NSNNTAATTA-
 A C G T A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:4
Score:0.98
Offset:3
Orientation:reverse strand
Alignment:NNNTAATTAS-
---TAATTASS
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G A C G T
A C G T A C G T A C G T G A C T T G C A G C T A G C A T A C G T T C G A A T G C T A C G

HOXA1/MA1495.1/Jaspar

Match Rank:5
Score:0.98
Offset:2
Orientation:forward strand
Alignment:NNNTAATTAS
--GTAATTAC
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A C G T A C G T A T C G A G C T T G C A C G T A A C G T A C G T C T G A A T G C

EMX1/MA0612.2/Jaspar

Match Rank:6
Score:0.98
Offset:2
Orientation:forward strand
Alignment:NNNTAATTAS
--CTAATTAG
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A C G T A C G T A T G C G A C T G T C A C G T A A C G T A C G T C G T A T A C G

Lhx8/MA0705.1/Jaspar

Match Rank:7
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NNNTAATTAS
--CTAATTAG
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:8
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NNNTAATTAS--
--YTAATTARNN
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G A C G T A C G T
A C G T A C G T A G T C G A C T T G C A G T C A A C G T A C G T C T G A T C A G G T A C G C A T

EN1/MA0027.2/Jaspar

Match Rank:9
Score:0.97
Offset:2
Orientation:forward strand
Alignment:NNNTAATTAS
--CTAATTAG
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A C G T A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G

en/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:NNNTAATTAS
---TAATTA-
 A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G
A C G T A C G T A C G T G A C T G T C A C G T A A C G T A C G T C G T A A C G T