Information for FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer (Motif 5)

C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
Reverse Opposite:
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T
p-value:
log p-value:-8.019e+02
FDR:0.000
Information Content per bp:1.634
Number of Target Sequences with motif
Percentage of Target Sequences with motif
Number of Background Sequences with motif
Percentage of Background Sequences with motif
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGTAAACAAAAAAGAACANN
AGTAAACAAAAAAGAACANN
 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACAAAAAAGAACANN
AAAGTAAACAAAAATT------
 A C G T A C G T C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTAAACAAAAAAGAACANN
AAGTAAACAAA----------
 A C G T C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NCU00019/MA0929.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACAAAAAAGAACANN
ATTGTAAACAAA----------
 A C G T A C G T C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
C G T A A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAACAAAAAAGAACANN
AAATAAACA------------
 A C G T C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTAAACAAAAAAGAACANN
-GTAAACA------------
 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTAAACAAAAAAGAACANN
-GCAAACAM-----------
 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
A C G T C T A G A G T C C G T A G T C A C G T A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTAAACAAAAAAGAACANN
-GTAAACA------------
 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTAAACAAAAAAGAACANN
-GTAAACAWBN---------
 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.3/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTAAACAAAAAAGAACANN
ATGTAAACATA----------
 A C G T C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A
C G T A C G A T C T A G C G A T G T C A G T C A G C T A A G T C G C T A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T