Information for ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer (Motif 431)

T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
Reverse Opposite:
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T
p-value:1e-1156
log p-value:-2.662e+03
FDR:NA
Information Content per bp:1.632
Number of Target Sequences with motif838.0
Percentage of Target Sequences with motif36.93%
Number of Background Sequences with motif338.3
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets51.6 +/- 17.8bp
Average Position of motif in Background46.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ARGAGGMCAAAATGW
ARGAGGMCAAAATGW
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:2
Score:0.72
Offset:8
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW
--------AAAATGN
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G G C A T

ROX8(RRM)/Drosophila_melanogaster-RNCMPT00148-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW
--------AAAATGG
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G A T C T A G A C T G

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ARGAGGMCAAAATGW-----
--GAGGTCAAAAGGTCAATG
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ARGAGGMCAAAATGW--
--GAGGTCAAAAGGTCA
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T
A C G T A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ARGAGGMCAAAATGW---
--AAGGTCAAAAGGTCAA
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW-
--------AAAAGGDG
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A C G T A C T A G C T A G C A T G T A C G

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:8
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW
-------AAAAAAG-
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A C G T A C G T A C T A G A C G T

Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA

Match Rank:9
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW
-------CAAAATT-
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A G A C T A G C T A C G T

JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ARGAGGMCAAAATGW
AAAACGACAAAA---
 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T
C G T A C G T A C G T A T G C A T G A C A C T G G T C A A G T C C T G A C T G A T C G A C G T A A C G T A C G T A C G T