Information for ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer (Motif 424)

G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A
Reverse Opposite:
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A
p-value:1e-296
log p-value:-6.833e+02
FDR:NA
Information Content per bp:1.626
Number of Target Sequences with motif1626.0
Percentage of Target Sequences with motif23.41%
Number of Background Sequences with motif3679.5
Percentage of Background Sequences with motif8.67%
Average Position of motif in Targets50.6 +/- 24.2bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:WDNCTGGGCA
WDNCTGGGCA
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:WDNCTGGGCA-
--NGTGGGCAT
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

RBPJ/MA1116.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:WDNCTGGGCA--
--CCTGGGAAAG
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

RIM101/Literature(Harbison)/Yeast

Match Rank:4
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:WDNCTGGGCA
---CTTGGCA
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A

RIM101(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:WDNCTGGGCA
---CTTGGCA
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:WDNCTGGGCA--
-TACTTGGCAGA
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-WDNCTGGGCA-----
NNNNTTGGGCACNNCN
 A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:WDNCTGGGCA--
--CSTGGGAAAD
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

RIM101/MA0368.1/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:WDNCTGGGCA
---CTTGGCG
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C T A G

ESRP2(RRM)/Homo_sapiens-RNCMPT00150-PBM/HughesRNA

Match Rank:10
Score:0.71
Offset:4
Orientation:forward strand
Alignment:WDNCTGGGCA-
----TGGGGAT
 G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C T A G C T G A C G A T