Information for ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer (Motif 416)

C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
Reverse Opposite:
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A
p-value:1e-3028
log p-value:-6.974e+03
FDR:NA
Information Content per bp:1.601
Number of Target Sequences with motif6879.0
Percentage of Target Sequences with motif25.17%
Number of Background Sequences with motif1186.6
Percentage of Background Sequences with motif4.42%
Average Position of motif in Targets52.4 +/- 22.1bp
Average Position of motif in Background50.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGGAACAGMA
TGGAACAGMA
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TGGAACAGMA-
-GGAACAGCCG
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T
A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

HSF1/MA0319.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TGGAACAGMA
ATGGAACA---
 A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
T C G A A C G T C T A G A C T G C G T A C G T A A G T C C T G A A C G T A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TGGAACAGMA--
GGGAACAGCCAC
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGGAACAGMA
AGTGGAA-----
 A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
C G T A C T A G C G A T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGAACAGMA
TGGAAAA---
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGGAACAGMA
CCAGGAACAG--
 A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGGAACAGMA
NNTGGAAANN--
 A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGAACAGMA
GGGAAAGG--
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
C T A G A C T G A C T G C G T A C G T A C T G A A C T G A C T G A C G T A C G T

lin-14/MA0261.1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGGAACAGMA
--GAACAC--
 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T