Information for Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer (Motif 40)

T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T
Reverse Opposite:
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T
p-value:1e-1825
log p-value:-4.202e+03
FDR:NA
Information Content per bp:1.763
Number of Target Sequences with motif1500.0
Percentage of Target Sequences with motif45.29%
Number of Background Sequences with motif590.1
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ATTGCATCAT
ATTGCATCAT
 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:1.00
Offset:0
Orientation:reverse strand
Alignment:ATTGCATCAT
ATTGCATCAK
 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

ATF4/MA0833.2/Jaspar

Match Rank:3
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--ATTGCATCAT--
NNATTGCATCATNN
 A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:4
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---ATTGCATCAT--
NNGATTGCATCATNN
 A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:5
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-ATTGCATCAT
GATTGCATCA-
 A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T
C T A G T C G A A C G T A C G T C A T G A G T C C T G A C G A T A G T C C G T A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:ATTGCATCAT-
-TTGCAACATN
 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:ATTGCATCAT---
ATGACATCATCNN
 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

NFIL3/MA0025.2/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--ATTGCATCAT-
NNATTGCATAANN
 A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:forward strand
Alignment:ATTGCATCAT
ATTGCATAA-
 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T

Pdp1/MA1702.1/Jaspar

Match Rank:10
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCATCAT-
NATTGCATAANN
 A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T
C G T A C T G A G C A T A C G T C T A G G A T C C T G A G A C T G T C A G C T A G A C T G C A T