Information for Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer (Motif 4)

G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
Reverse Opposite:
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T
p-value:1e-2462
log p-value:-5.669e+03
FDR:NA
Information Content per bp:1.643
Number of Target Sequences with motif4676.0
Percentage of Target Sequences with motif58.38%
Number of Background Sequences with motif3979.3
Percentage of Background Sequences with motif10.04%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NAHCAGCTGD
NAHCAGCTGD
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NAHCAGCTGD--
GCACAGCTGTGC
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T
T C A G T G A C T C G A T G A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

E-box/Drosophila-Promoters/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-NAHCAGCTGD-
NDAACAGCTGTT
 A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T
G A T C C T G A T C G A G C T A G T A C G C T A C T A G G A T C C G A T A C T G C G A T A G C T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:4
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NAHCAGCTGD-
-NNCAGCTGNN
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T
A C G T A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NAHCAGCTGD
NAACAGCTGG
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NAHCAGCTGD
-AACAGCTG-
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

MYF5/MA1641.1/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NAHCAGCTGD--
GAACAGCTGTTC
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NAHCAGCTGD-
-AACAGCTGTT
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T
A C G T T C G A T G C A G T A C C G T A A C T G T G A C G C A T A C T G A G C T A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NAHCAGCTGD
CAGCAGCTGN
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NAHCAGCTGD
NAACAGCTGT
 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T