Information for Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer (Motif 393)

T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
Reverse Opposite:
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C
p-value:1e-4346
log p-value:-1.001e+04
FDR:NA
Information Content per bp:1.640
Number of Target Sequences with motif5087.0
Percentage of Target Sequences with motif43.46%
Number of Background Sequences with motif1112.1
Percentage of Background Sequences with motif3.01%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTCACGTGGT
GTCACGTGGT
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGGT
GTCACGTGAT
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

TFE3/MA0831.2/Jaspar

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGGT
GTCACGTG--
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T

TYE7(MacIsaac)/Yeast

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GTCACGTGGT
GTCACGTG--
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
C T A G G C A T A T G C C G T A A T G C T C A G G C A T A T C G A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTGGT
GGTCACGTGC-
 A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTGGT
GGTCACGTGA-
 A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGGT
GTCACGTGGM
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

TFEC/MA0871.2/Jaspar

Match Rank:8
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTGGT
NGTCACGTGNN
 A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GTCACGTGGT
GHCACGTG--
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T

PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer

Match Rank:10
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GTCACGTGGT-
-BCACGTGVDN
 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T
A C G T A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C A G C G A T C A T G