Information for Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer (Motif 391)

T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
Reverse Opposite:
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G
p-value:1e-8396
log p-value:-1.933e+04
FDR:NA
Information Content per bp:1.693
Number of Target Sequences with motif33791.0
Percentage of Target Sequences with motif44.10%
Number of Background Sequences with motif10460.2
Percentage of Background Sequences with motif14.53%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:MCAGCTGBYH
MCAGCTGBYH
 T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:MCAGCTGBYH
MCAGCTGKTN
 T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-MCAGCTGBYH
NACAGCTGTT-
 A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
T C G A T C G A A G T C C G T A A C T G T G A C C G A T C A T G A C G T A G C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-MCAGCTGBYH-
GCCAGCTGBTNB
 A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---MCAGCTGBYH
NNVVCAGCTGBN-
 A C G T A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.95
Offset:0
Orientation:forward strand
Alignment:MCAGCTGBYH
ACAGCTGTTN
 T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-MCAGCTGBYH
DMCAGATGKS-
 A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:MCAGCTGBYH
CCAGCTGTTN
 T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

PL0006.1_hlh-2::lin-32/Jaspar

Match Rank:9
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----MCAGCTGBYH--
AAGAACAGCTGTTCTC
 A C G T A C G T A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C A C G T A C G T
G T A C T G C A C T A G T G C A T G C A G T A C C T G A A C T G T G A C A G C T A C T G A C G T A G C T G T A C G A C T T A G C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:MCAGCTGBYH
-CAGCTGNT-
 T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T