Information for CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer (Motif 38)

T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
Reverse Opposite:
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T
p-value:1e-904
log p-value:-2.082e+03
FDR:NA
Information Content per bp:1.563
Number of Target Sequences with motif781.0
Percentage of Target Sequences with motif23.58%
Number of Background Sequences with motif308.8
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets50.4 +/- 19.8bp
Average Position of motif in Background55.8 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NTNATGCAAYMNNHTGMAAY
NTNATGCAAYMNNHTGMAAY
 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NTNATGCAAYMNNHTGMAAY
-AGATGCAATCCC-------
 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:NTNATGCAAYMNNHTGMAAY
-TTATGCAAT----------
 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--NTNATGCAAYMNNHTGMAAY
AAATGATGCAATCAT-------
 A C G T A C G T T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:NTNATGCAAYMNNHTGMAAY
MTGATGCAAT----------
 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ATF4/MA0833.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--NTNATGCAAYMNNHTGMAAY
AAATGATGCAATAA--------
 A C G T A C G T T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:NTNATGCAAYMNNHTGMAAY
-TGATGCAATC---------
 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
A C G T A C G T T A C G C G T A A G C T A C T G G T A C C G T A G T C A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NTNATGCAAYMNNHTGMAAY
TATTATGCAATAT--------
 A C G T T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HLF/MA0043.3/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--NTNATGCAAYMNNHTGMAAY
TTGTTATGCAACAA--------
 A C G T A C G T T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pdp1/MA1702.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NTNATGCAAYMNNHTGMAAY
AATTATGCAATT---------
 A C G T T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T
C G T A C T G A C G A T C A G T C T G A G A C T C T A G G A T C T G C A C G T A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T