Information for TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer (Motif 372)

T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
Reverse Opposite:
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C
p-value:1e-679
log p-value:-1.565e+03
FDR:NA
Information Content per bp:1.669
Number of Target Sequences with motif2074.0
Percentage of Target Sequences with motif44.22%
Number of Background Sequences with motif4805.2
Percentage of Background Sequences with motif11.67%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:SMCATCTGKH
SMCATCTGKH
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:SMCATCTGKH-
-MCAGCTGKTN
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:3
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-SMCATCTGKH
DRVCAGCTGK-
 A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G A C G T

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:SMCATCTGKH
NNCATCTGNN
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

TWIST1/MA1123.2/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-SMCATCTGKH--
NNACATCTGGNNN
 A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:SMCATCTGKH--
GCCAGCTGBTNB
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:SMCATCTGKH
NACAGCTGTT
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
T C G A T C G A A G T C C G T A A C T G T G A C C G A T C A T G A C G T A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:SMCATCTGKH
RCCATMTGTT
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Tal1

Match Rank:9
Score:0.92
Offset:2
Orientation:forward strand
Alignment:SMCATCTGKH
--CATCTG--
 T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-SMCATCTGKH--
NNCCATCTGTNNN
 A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C