Information for Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer (Motif 365)

T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
Reverse Opposite:
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C
p-value:1e-794
log p-value:-1.830e+03
FDR:NA
Information Content per bp:1.675
Number of Target Sequences with motif898.0
Percentage of Target Sequences with motif41.46%
Number of Background Sequences with motif1225.3
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets100.6 +/- 29.5bp
Average Position of motif in Background99.6 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGTGYTGACAGS
GGTGYTGACAGS
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.83
Offset:4
Orientation:forward strand
Alignment:GGTGYTGACAGS
----TTGACAGC
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

achi/MA0207.1/Jaspar

Match Rank:3
Score:0.82
Offset:5
Orientation:forward strand
Alignment:GGTGYTGACAGS
-----TGACAG-
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G A C G T

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GGTGYTGACAGS
--ANNTGACAGN
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T G C T A C T A G C G A T A C G T A C T G C G T A A G T C C G T A A T C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.81
Offset:4
Orientation:forward strand
Alignment:GGTGYTGACAGS
----TTGACAGG
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

vis/MA0252.1/Jaspar

Match Rank:6
Score:0.81
Offset:5
Orientation:forward strand
Alignment:GGTGYTGACAGS
-----TGACAG-
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A T C G A C G T

hth/MA0227.1/Jaspar

Match Rank:7
Score:0.80
Offset:5
Orientation:forward strand
Alignment:GGTGYTGACAGS
-----TGACAG-
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C T G A A C T G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.80
Offset:4
Orientation:forward strand
Alignment:GGTGYTGACAGS
----TTGACAG-
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GGTGYTGACAGS
---RHTGWCAR-
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GGTGYTGACAGS-
---VBTGWCAGCB
 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C