Information for Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer (Motif 346)

C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
Reverse Opposite:
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T
p-value:1e-1160
log p-value:-2.672e+03
FDR:NA
Information Content per bp:1.732
Number of Target Sequences with motif3801.0
Percentage of Target Sequences with motif49.11%
Number of Background Sequences with motif5652.2
Percentage of Background Sequences with motif14.16%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGAGC
RGKGGGCGGAGC
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGAGC--
AGGGGGCGGGGCTG
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:RGKGGGCGGAGC-
-GGGGGCGGGGCC
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGAGC
RGKGGGCGKGGC
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

btd/MA0443.1/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGAGC
AGGGGGCGGA--
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
C T G A C T A G C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T G A A C G T A C G T

KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:RGKGGGCGGAGC-
-VDGGGYGGGGCY
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T
A C G T T C A G C T A G C T A G A C T G A C T G G A T C A C T G A C T G C T A G C T A G A G T C G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-RGKGGGCGGAGC--
NNVDGGGYGGGGCYN
 A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:RGKGGGCGGAGC--
--GGGGCGGGGCCR
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T
A C G T A C G T C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

KLF15/MA1513.1/Jaspar

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:RGKGGGCGGAGC
-GGGGGCGGGGC
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
A C G T T A C G T A C G A T C G A T C G C A T G A G T C A T C G A T C G A T C G T A C G T A G C

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:RGKGGGCGGAGC
--GGGGNGGGGC
 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C