Information for Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer (Motif 334)

T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
Reverse Opposite:
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C
p-value:1e-463
log p-value:-1.067e+03
FDR:NA
Information Content per bp:1.713
Number of Target Sequences with motif3252.0
Percentage of Target Sequences with motif12.81%
Number of Background Sequences with motif1329.9
Percentage of Background Sequences with motif5.25%
Average Position of motif in Targets49.9 +/- 26.0bp
Average Position of motif in Background48.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:SNGCACCTGCHS
SNGCACCTGCHS
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:SNGCACCTGCHS-
CAGCACCTGCCCC
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:SNGCACCTGCHS-
CGGCACCTGCCCC
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.98
Offset:1
Orientation:forward strand
Alignment:SNGCACCTGCHS
-CGCACCTGCCG
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.98
Offset:1
Orientation:forward strand
Alignment:SNGCACCTGCHS
-CGCACCTGCCC
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:6
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:SNGCACCTGCHS
-NGCACCTGCN-
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:7
Score:0.97
Offset:1
Orientation:forward strand
Alignment:SNGCACCTGCHS
-TRCACCTGCY-
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:SNGCACCTGCHS
-CCCACCTGCGC
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

esg/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:SNGCACCTGCHS
NNGCACCTGTNN
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A T G C G A C T T C A G A T G C C G T A A G T C G A T C A C G T C A T G G A C T A G C T C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:SNGCACCTGCHS
-NNCACCTGNN-
 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T