Information for RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer (Motif 321)

T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
Reverse Opposite:
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G
p-value:1e-412
log p-value:-9.489e+02
FDR:NA
Information Content per bp:1.635
Number of Target Sequences with motif737.0
Percentage of Target Sequences with motif60.36%
Number of Background Sequences with motif143.0
Percentage of Background Sequences with motif9.82%
Average Position of motif in Targets100.7 +/- 46.4bp
Average Position of motif in Background97.8 +/- 80.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NWAACCACADNN
NWAACCACADNN
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NWAACCACADNN
-AAACCACAGAN
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NWAACCACADNN
NAAACCACAG--
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NWAACCACADNN
-AAACCACAGC-
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NWAACCACADNN
-AAACCACANN-
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

MET28/MA0332.1/Jaspar

Match Rank:6
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:NWAACCACADNN
----CCACAG--
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T

MET28(MacIsaac)/Yeast

Match Rank:7
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:NWAACCACADNN
----CCACAG--
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.85
Offset:1
Orientation:forward strand
Alignment:NWAACCACADNN
-AAACCGCAA--
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:9
Score:0.85
Offset:0
Orientation:forward strand
Alignment:NWAACCACADNN
AAAACCTCAAAT
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

MET31(MacIsaac)/Yeast

Match Rank:10
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:NWAACCACADNN
---GCCACACC-
 T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C
A C G T A C G T A C G T T C A G G T A C A G T C C T G A A G T C C G T A A T G C G A T C A C G T