Information for Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer (Motif 307)

G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
Reverse Opposite:
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A
p-value:1e-521
log p-value:-1.200e+03
FDR:NA
Information Content per bp:1.713
Number of Target Sequences with motif2222.0
Percentage of Target Sequences with motif24.53%
Number of Background Sequences with motif2957.1
Percentage of Background Sequences with motif7.71%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:HTTTCCCASG
HTTTCCCASG
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

RBPJ/MA1116.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:HTTTCCCASG
NNTTCCCANN
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:HTTTCCCASG
-GTTCCCACG
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
A C G T C A T G A C G T A C G T A G T C G A T C A G T C C G T A G A T C C T A G

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:HTTTCCCASG-
-TTTCCCACAN
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T
A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

Su(H)/MA0085.1/Jaspar

Match Rank:5
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----HTTTCCCASG-
ATCTCGGTTCCCACAN
 A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T
G C T A A C G T G A T C A C G T T G A C A C T G A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C C T G A T A C G

Su(H)/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:HTTTCCCASG
--CTCCCAC-
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
A C G T A C G T A G C T A C G T A G T C A G C T A G T C C G T A A G C T A C G T

Ik-1

Match Rank:7
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--HTTTCCCASG-
GGTATTCCCAANN
 A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T
C T A G C T A G G A C T C T G A C G A T A C G T A G T C A G T C A G T C C T G A G T C A C T A G A G C T

Pcbp2(KH)/Danio_rerio-RNCMPT00246-PBM/HughesRNA

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:HTTTCCCASG
NTTTCCC---
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
T G A C G C A T C G A T C G A T G T A C A G T C A G T C A C G T A C G T A C G T

ESRP2(RRM)/Homo_sapiens-RNCMPT00150-PBM/HughesRNA

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:HTTTCCCASG
-ATCCCCA--
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
A C G T G C T A A G C T A G T C A G T C A G T C A G T C C G T A A C G T A C G T

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:10
Score:0.75
Offset:0
Orientation:forward strand
Alignment:HTTTCCCASG
CTTTCCCT--
 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G
G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T A C G T