Information for RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer (Motif 306)

C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G
Reverse Opposite:
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C
p-value:1e-635
log p-value:-1.463e+03
FDR:NA
Information Content per bp:1.598
Number of Target Sequences with motif938.0
Percentage of Target Sequences with motif21.17%
Number of Background Sequences with motif809.0
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets51.7 +/- 23.4bp
Average Position of motif in Background48.0 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGGRAARRGRMCAGMTG
GGGRAARRGRMCAGMTG
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.71
Offset:7
Orientation:forward strand
Alignment:GGGRAARRGRMCAGMTG--
-------NNVVCAGCTGBN
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:3
Score:0.70
Offset:8
Orientation:forward strand
Alignment:GGGRAARRGRMCAGMTG-
--------NAMCAGCTGK
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:4
Score:0.70
Offset:9
Orientation:reverse strand
Alignment:GGGRAARRGRMCAGMTG--
---------DMCAGATGKS
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:5
Score:0.70
Offset:8
Orientation:reverse strand
Alignment:GGGRAARRGRMCAGMTG-
--------DRVCAGCTGK
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.69
Offset:7
Orientation:forward strand
Alignment:GGGRAARRGRMCAGMTG--
-------VNAVCAGCTGGC
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:7
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:GGGRAARRGRMCAGMTG--
---------NACAGCTGTT
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G T G A C C G A T C A T G A C G T A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.68
Offset:8
Orientation:reverse strand
Alignment:GGGRAARRGRMCAGMTG-
--------NNVCAGCTGB
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.68
Offset:9
Orientation:forward strand
Alignment:GGGRAARRGRMCAGMTG
---------ANCAGCTG
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:GGGRAARRGRMCAGMTG-
--------NAACAGCTGT
 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T