Information for Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer (Motif 300)

T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
Reverse Opposite:
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T
p-value:1e-2545
log p-value:-5.862e+03
FDR:NA
Information Content per bp:1.677
Number of Target Sequences with motif6713.0
Percentage of Target Sequences with motif77.61%
Number of Background Sequences with motif8575.8
Percentage of Background Sequences with motif22.68%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ACAGCTGTTN
ACAGCTGTTN
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTN
GCAGCTGTNN
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ACAGCTGTTN
VCAGCTGBNN
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:4
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCTGTTN
NNACAGCTGTNN
 A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:5
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCTGTTN
NACAGCTGTT-
 A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C G A T C G A A G T C C G T A A C T G T G A C C G A T C A T G A C G T A G C T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTN
ACAGCTGTTV
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ACAGCTGTTN
NCAGCTGCTG
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MYF5/MA1641.1/Jaspar

Match Rank:8
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCTGTTN
NNACAGCTGTNN
 A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCTGTTN-
NVCAGCTGBBNN
 A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:ACAGCTGTTN
HCAGCTGDTN
 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T