Information for BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer (Motif 30)

T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
Reverse Opposite:
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G
p-value:1e-12339
log p-value:-2.841e+04
FDR:NA
Information Content per bp:1.592
Number of Target Sequences with motif12097.0
Percentage of Target Sequences with motif39.79%
Number of Background Sequences with motif538.5
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets50.2 +/- 15.4bp
Average Position of motif in Background51.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC
CNNBRGCGCCCCCTGSTGGC
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC--
---TAGCGCCCCCTGGTGGCCA
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T
A C G T A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC--
--ANAGTGCCACCTGGTGGCCA
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T
A C G T A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.82
Offset:5
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
-----GCGCCCCCTGNN---
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T A C G T

CTCF/MA0531.1/Jaspar

Match Rank:5
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
----GGCGCCATCTAGCGG-
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
A C G T A C G T A C G T A C G T C T A G C T A G G T A C C T A G G T A C A G T C T G C A G A C T A G T C G A C T C T G A A C T G A G T C C A T G T A C G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC
-GGTCCCGCCCCCTTCTC--
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC-
------GGCCYCCTGCTGDGH
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

btd/MA0443.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
----TCCGCCCCCT------
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
A C G T A C G T A C G T A C G T G A C T G T A C A G T C A C T G A G T C A G T C A G T C G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
--------CCCCCTGCTGTG
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC-
------GACCCCCCGCTGTGC
 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C