Information for Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer (Motif 274)

G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
Reverse Opposite:
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G
p-value:1e-862
log p-value:-1.986e+03
FDR:NA
Information Content per bp:1.584
Number of Target Sequences with motif1441.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif138.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NTAATTDGCYAATTANNWWD
NTAATTDGCYAATTANNWWD
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

PH0060.1_Hoxb5/Jaspar

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---ATGNGCTAATTANCNT-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---NTNNGCTAATTANCNT-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---ATNNACTAATTACTTT-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---NTNAGNTAATTACCTN-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---NTGNGCTAATTACCNN-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---NTGAGCTAATTACCNT-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T A C G T

ATHB34/MA1328.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NTAATTDGCYAATTANNWWD
TTTAATCATTAATTA-----
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
C G A T G C A T G C A T G C T A C G T A G C A T G T A C T G C A A G C T G C A T C G T A C T G A G A C T A G C T C T G A A C G T A C G T A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---CTGANNTAATTATNNN-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:NTAATTDGCYAATTANNWWD
---NTNAGGTAATTACCTT-
 G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A
A C G T A C G T A C G T G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T A C G T