Information for p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer (Motif 265)

C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
Reverse Opposite:
A C T G C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C
p-value:1e-4322
log p-value:-9.968e+03
FDR:NA
Information Content per bp:1.508
Number of Target Sequences with motif4803.0
Percentage of Target Sequences with motif12.78%
Number of Background Sequences with motif238.8
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets100.2 +/- 33.3bp
Average Position of motif in Background106.1 +/- 69.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AACATGCCCAGACATGCCCN
AACATGCCCAGACATGCCCN
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:2
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AACATGCCCAGACATGCCCN
AACATGCCCAGACATGCCCN
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
NGCATGTCNNGACATGCNNN
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T A G C T A G A G T C G T C A C G A T A C T G G A C T G A T C A G T C C T A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C A G C T C A G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
RRCATGYCHGGACWTGYYYN
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

TP53/MA0106.3/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AACATGCCCAGACATGCCCN
AACATGCCCGGGCATGTC--
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
GACATGTCNNGACATGTN--
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
GACATGTCCCAACATGTT--
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C A T G C T G A A G T C C T G A G C A T A C T G G A C T G A T C T G A C A G T C C T G A C T G A A G T C C G T A G A C T A C T G G A C T G A C T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
---ATGCCCGGGCATGT---
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
AACCGGTTNNAACCGGTTTN
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

SMAD5/MA1557.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AACATGCCCAGACATGCCCN
----TGTCTAGACA------
 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C
A C G T A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T