Information for Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer (Motif 262)

C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
Reverse Opposite:
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T
p-value:1e-5528
log p-value:-1.273e+04
FDR:NA
Information Content per bp:1.608
Number of Target Sequences with motif21120.0
Percentage of Target Sequences with motif60.40%
Number of Background Sequences with motif7084.4
Percentage of Background Sequences with motif21.03%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:RCCATMTGTT
RCCATMTGTT
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RCCATMTGTT
ACCATCTGTT
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:RCCATMTGTT
GCCATCTGTT
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:RCCATMTGTT--
GCCAGCTGBTNB
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:RCCATMTGTT-
-MCAGCTGKTN
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-RCCATMTGTT--
NNCCATCTGTNNN
 A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--RCCATMTGTT-
NNNCCATCTGTNN
 A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:8
Score:0.92
Offset:1
Orientation:forward strand
Alignment:RCCATMTGTT-
-MCAGCTGBYH
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RCCATMTGTT
SMCATCTGKH
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.91
Offset:1
Orientation:forward strand
Alignment:RCCATMTGTT
-CCATATGT-
 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T