Information for Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer (Motif 252)

A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A
Reverse Opposite:
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C
p-value:1e-23250
log p-value:-5.354e+04
FDR:NA
Information Content per bp:1.862
Number of Target Sequences with motif26748.0
Percentage of Target Sequences with motif49.06%
Number of Background Sequences with motif1641.5
Percentage of Background Sequences with motif3.41%
Average Position of motif in Targets52.3 +/- 19.7bp
Average Position of motif in Background49.8 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GATTTGCATA
GATTTGCATA
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

POU2F3/MA0627.2/Jaspar

Match Rank:2
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-GATTTGCATA--
NNATTTGCATATN
 A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.98
Offset:1
Orientation:forward strand
Alignment:GATTTGCATA-
-ATTTGCATAA
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:GATTTGCATA-
-ATTTGCATAT
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GATTTGCATA
-ATTTGCATA
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GATTTGCATA
-ATTTGCATA
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--GATTTGCATA-
TTCATTTGCATAT
 A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---GATTTGCATA---
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---GATTTGCATA---
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GATTTGCATA--
AATTTGCATANT
 A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T