Information for Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer (Motif 251)

A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
Reverse Opposite:
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A
p-value:1e-55
log p-value:-1.272e+02
FDR:NA
Information Content per bp:1.744
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif21.07%
Number of Background Sequences with motif617.0
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets103.6 +/- 39.0bp
Average Position of motif in Background98.4 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGACCTTTNCNT
TGACCTTTNCNT
 A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR4A1/MA1112.2/Jaspar

Match Rank:2
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTTTNCNT
NNTGACCTTTNN--
 A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T A C G T

nhr-6/MA1451.1/Jaspar

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTNCNT
TGACCTTT----
 A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
A C G T A C T G C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.95
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTTNCNT
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTTTNCNT
NNTGACCTTTN---
 A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.93
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTTNCNT
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTNCNT
TGACCTYTGVMC
 A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-TGACCTTTNCNT
GTGACCTTGRVN-
 A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TGACCTTTNCNT
NTGACCTTGA---
 A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTNCNT
CTGACCTTTG---
 A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T