Information for Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer (Motif 24)

G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A
Reverse Opposite:
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A
p-value:1e-773
log p-value:-1.780e+03
FDR:NA
Information Content per bp:1.549
Number of Target Sequences with motif3881.0
Percentage of Target Sequences with motif16.65%
Number of Background Sequences with motif1480.6
Percentage of Background Sequences with motif5.67%
Average Position of motif in Targets50.2 +/- 23.5bp
Average Position of motif in Background48.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA
NNNCTTTCCAGGAAA
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:NNNCTTTCCAGGAAA-
----TTTCCNGGAAAN
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.94
Offset:4
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA
----TTTCCAGGAAA
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.93
Offset:2
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA-
--NATTTCCNGGAAAT
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.91
Offset:2
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA-
--NNCTTCCNGGAAGN
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T
A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.90
Offset:4
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA---
----TTTCCAGGAAATGG
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.89
Offset:4
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA
----CTTCCNGGAA-
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A
A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.89
Offset:5
Orientation:reverse strand
Alignment:NNNCTTTCCAGGAAA-
-----TTCTTGGAAAN
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.88
Offset:4
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA
----CTTCTGGGAAA
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.88
Offset:2
Orientation:forward strand
Alignment:NNNCTTTCCAGGAAA---
--TCTTTCGAGGAATTTG
 G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T
A C G T A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G