Information for Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer (Motif 220)

A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T
Reverse Opposite:
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A
p-value:1e-1407
log p-value:-3.241e+03
FDR:NA
Information Content per bp:1.739
Number of Target Sequences with motif3323.0
Percentage of Target Sequences with motif30.10%
Number of Background Sequences with motif2156.9
Percentage of Background Sequences with motif5.67%
Average Position of motif in Targets51.1 +/- 22.6bp
Average Position of motif in Background50.6 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:BAACAGCTGT
BAACAGCTGT
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

MYF5/MA1641.1/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:BAACAGCTGT--
NNACAGCTGTNN
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.98
Offset:1
Orientation:forward strand
Alignment:BAACAGCTGT
-AACAGCTG-
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:BAACAGCTGT--
GCACAGCTGTGC
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T
T C A G T G A C T C G A T G A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:BAACAGCTGT
NAACAGCTGT
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:BAACAGCTGT-
-AACAGCTGTT
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T
A C G T T C G A T G C A G T A C C G T A A C T G T G A C G C A T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.96
Offset:1
Orientation:forward strand
Alignment:BAACAGCTGT--
-AACAGCTGCAG
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-BAACAGCTGT-
NNAGCAGCTGCT
 A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:BAACAGCTGT
CAGCAGCTGN
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:10
Score:0.96
Offset:1
Orientation:forward strand
Alignment:BAACAGCTGT-
-AACAGCTGTC
 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C