Information for MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer (Motif 219)

C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C
p-value:1e-1936
log p-value:-4.460e+03
FDR:NA
Information Content per bp:1.792
Number of Target Sequences with motif7048.0
Percentage of Target Sequences with motif56.60%
Number of Background Sequences with motif6592.8
Percentage of Background Sequences with motif18.57%
Average Position of motif in Targets100.4 +/- 37.0bp
Average Position of motif in Background100.3 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGCVGTTR
GGCVGTTR
 C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GGCVGTTR-
TGGCAGTTGG
 A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGCVGTTR
GGCGGTTG
 C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A
A C T G C A G T A G T C A T C G A C T G A C G T A C G T C T A G

Gam1/MA0034.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGCVGTTR--
GGCGGTTGTC
 C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T
A C T G C A T G A G T C A T C G A C T G A C G T A C G T C T A G A G C T A T G C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GGCVGTTR-
BRRCVGTTDN
 A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GGCVGTTR-
GKRCVGTTRN
 A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T
T A C G C A T G C T G A G T A C T C G A A C T G A C G T A C G T C T A G C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GGCVGTTR----
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AtMYB77(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----GGCVGTTR-
AAGTGACAGTTAC
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T
T G C A T C G A C A T G A G C T T C A G C T G A A G T C C T A G A C T G A C G T A C G T C T G A A T G C

F3A4.140/MA0575.1/Jaspar

Match Rank:9
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----GGCVGTTR-
AAGTGACAGTTAC
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T
T G C A T C G A C A T G A G C T T C A G C T G A A G T C C T A G A C T G A C G T A C G T C T G A A T G C

MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGCVGTTR
RKYNGTTA
 C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A
C T G A C A T G A G T C G A T C A C T G A C G T A C G T C T G A