Information for Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer (Motif 215)

T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
Reverse Opposite:
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C
p-value:1e-210
log p-value:-4.841e+02
FDR:NA
Information Content per bp:1.670
Number of Target Sequences with motif2891.0
Percentage of Target Sequences with motif12.55%
Number of Background Sequences with motif1664.1
Percentage of Background Sequences with motif6.84%
Average Position of motif in Targets25.6 +/- 11.3bp
Average Position of motif in Background24.7 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:VGCTGWCAVB
VGCTGWCAVB
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:VGCTGWCAVB
-RHTGWCAR-
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:VGCTGWCAVB
ARNTGACA--
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

vis/MA0252.1/Jaspar

Match Rank:4
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:VGCTGWCAVB
--CTGTCA--
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T A C G T A T G C A C G T A C T G A C G T A G T C C G T A A C G T A C G T

achi/MA0207.1/Jaspar

Match Rank:5
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:VGCTGWCAVB
--CTGTCA--
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T A C G T G A T C A C G T C T A G A C G T A G T C C G T A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VGCTGWCAVB
-GCTGTCAA-
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

hth/MA0227.1/Jaspar

Match Rank:7
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:VGCTGWCAVB
--CTGTCA--
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T A C G T G T A C A G C T A C T G A C G T A G T C C G T A A C G T A C G T

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:VGCTGWCAVB-
-NCTGTCANNT
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T
A C G T T C A G A T G C A C G T A C T G A C G T A G T C C G T A G C T A G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:VGCTGWCAVB
-CCTGTCAA-
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:VGCTGWCAVB
--NTGTCAN-
 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T