Information for Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer (Motif 213)

C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
Reverse Opposite:
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C
p-value:1e-1827
log p-value:-4.208e+03
FDR:NA
Information Content per bp:1.614
Number of Target Sequences with motif2974.0
Percentage of Target Sequences with motif15.09%
Number of Background Sequences with motif466.3
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:DCYAAAAATAGM
DCYAAAAATAGM
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:DCYAAAAATAGM
KCCAAAAATAGC
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:DCYAAAAATAGM
GCTAAAAATAGC
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--DCYAAAAATAGM-
ATGCTAAAAATAGAA
 A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-DCYAAAAATAGM--
TTCTAAAAATAGAAA
 A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:DCYAAAAATAGM
-CCAAAAATAG-
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:DCYAAAAATAGM
ACTATAAATAGA
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:DCYAAAAATAGM
GCTATAAATAGC
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:DCYAAAAATAGM
-CTAAAAATAA-
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
A C G T A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T

RLM1(MacIsaac)/Yeast

Match Rank:10
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:DCYAAAAATAGM
TCTATAAATA--
 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C
G A C T T A G C A G C T G C T A G C A T G T C A G T C A C G T A G C A T C T G A A C G T A C G T