Information for AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer (Motif 2)

A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
Reverse Opposite:
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C
p-value:1e-10695
log p-value:-2.463e+04
FDR:NA
Information Content per bp:1.657
Number of Target Sequences with motif26194.0
Percentage of Target Sequences with motif44.86%
Number of Background Sequences with motif5413.7
Percentage of Background Sequences with motif9.54%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:SCCTSAGGSCAW
SCCTSAGGSCAW
 A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:SCCTSAGGSCAW
GCCTCAGGGCAT
 A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

TFAP2E/MA1569.1/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-SCCTSAGGSCAW
CGCCTCAGGCG--
 A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
G A T C A T C G A G T C A G T C A G C T T A G C T C G A A C T G A C T G A T G C C T A G A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTGCCTCAGGCCA-
 A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:8
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---SCCTSAGGSCAW
NNCGCCTCAGGCNN-
 A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-SCCTSAGGSCAW
AGCCTCAGGCA--
 A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--SCCTSAGGSCAW
TTGCCCTAGGGCAT
 A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T