Information for IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer (Motif 177)

T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
Reverse Opposite:
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C
p-value:1e-1623
log p-value:-3.738e+03
FDR:NA
Information Content per bp:1.781
Number of Target Sequences with motif1659.0
Percentage of Target Sequences with motif23.66%
Number of Background Sequences with motif444.9
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
GAAAGTGAAAGT
 T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGT
GAAACTGAAACT
 T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
GAAASYGAAASY
 T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
GRAASTGAAAST
 T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGT
GAAAMTGAAACT
 T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.93
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGTGAAAGT----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Blimp-1/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTGAAAGT
AANGAAAGTGAAAGT
 A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
G T C A T G C A G A C T C T A G C G T A T C G A C G T A C T A G A G C T A C T G C G T A C T G A C G T A C T A G A G C T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GAAAGTGAAAGT
ACGAAAGCGAAAGT
 A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTGAAAGT--
GGAAANTGAAACTNA
 A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGAAAGT-----
GGAAAGCGAAACCAAAAC
 A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C