Information for HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer (Motif 168)

C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
Reverse Opposite:
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A
p-value:1e-3533
log p-value:-8.137e+03
FDR:NA
Information Content per bp:1.776
Number of Target Sequences with motif19217.0
Percentage of Target Sequences with motif37.67%
Number of Background Sequences with motif7259.6
Percentage of Background Sequences with motif14.68%
Average Position of motif in Targets100.3 +/- 49.0bp
Average Position of motif in Background100.5 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TTTTATKRGG
TTTTATKRGG
 C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:TTTTATKRGG
TTTTATTRGN
 C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TTTTATKRGG
TTTTATTRGN
 C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATKRGG
NTTTTATDRG-
 A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATKRGG
GTTTTATTGGN
 A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.93
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATKRGG--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATKRGG--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13/MA0901.2/Jaspar

Match Rank:8
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATKRGG-
NNATTTTATTGGNN
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

Abd-B/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TTTTATKRGG
TTTTATGA--
 C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
G A C T C G A T A C G T A C G T C G T A A G C T A C T G C T G A A C G T A C G T

abd-B/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TTTTATKRGG
GTTTTATGA--
 A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G
A T C G C G A T C G A T A C G T C G A T C G T A A G C T C A T G C T G A A C G T A C G T