Information for HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer (Motif 161)

C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
Reverse Opposite:
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C
p-value:1e-22222
log p-value:-5.117e+04
FDR:NA
Information Content per bp:1.730
Number of Target Sequences with motif33356.0
Percentage of Target Sequences with motif56.70%
Number of Background Sequences with motif3854.7
Percentage of Background Sequences with motif6.81%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NTATYGATCH
NTATYGATCH
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:NTATYGATCH
NTATCGATTA
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:NTATYGATCH--
--ATTGATTYND
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NTATYGATCH
TTATCGATTA
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:5
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NTATYGATCH-
-TATCGATNAN
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T
A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NTATYGATCH
-TATTGAYY-
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

ceh-48/MA0921.1/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:NTATYGATCH
NTATCGATN-
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
C G A T C G A T C G T A C G A T G A T C C A T G C T G A G C A T G A C T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---NTATYGATCH---
NNTTTATTGATTTTTT
 A C G T A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

Dref/MA1456.1/Jaspar

Match Rank:9
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-NTATYGATCH
GCTATCGATA-
 A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
T C A G G A T C A C G T C G T A A C G T A G T C A C T G C G T A G C A T C G T A A C G T

ceh-28/MA1445.1/Jaspar

Match Rank:10
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:NTATYGATCH
AAATCGATTT
 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C
G C T A C G T A T C G A A G C T G T A C A C T G C T G A A G C T G C A T C G A T