Information for Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer (Motif 160)

G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C
Reverse Opposite:
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A
p-value:1e-11687
log p-value:-2.691e+04
FDR:NA
Information Content per bp:1.700
Number of Target Sequences with motif32235.0
Percentage of Target Sequences with motif48.67%
Number of Background Sequences with motif7404.8
Percentage of Background Sequences with motif11.96%
Average Position of motif in Targets50.7 +/- 25.5bp
Average Position of motif in Background50.0 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TATTGAYY
TATTGAYY
 G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C
G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:TATTGAYY---
-ATTGATTYND
 G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-TATTGAYY-
NTATYGATCH
 A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

ceh-48/MA0921.1/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TATTGAYY
NTATCGATN
 A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C
C G A T C G A T C G T A C G A T G A T C C A T G C T G A G C A T G A C T

ONECUT1/MA0679.2/Jaspar

Match Rank:5
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----TATTGAYY----
NNTTTATTGATTTTTT
 A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TATTGAYY-
NTATCGATTA
 A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TATTGAYY-
TTATCGATTA
 A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:8
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TATTGAYY--
TATCGATNAN
 G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T
A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

CBF(- other)/several species/AthaMap

Match Rank:9
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TATTGAYY--
NNNNATTGNNNNN
 A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T
C G A T C G T A C G A T C G T A C G T A A C G T A C G T A C T G C A T G G C T A G C T A G C A T G C A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TATTGAYY---
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C