Information for HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer (Motif 157)

C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
Reverse Opposite:
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C
p-value:1e-2595
log p-value:-5.977e+03
FDR:NA
Information Content per bp:1.656
Number of Target Sequences with motif3516.0
Percentage of Target Sequences with motif18.87%
Number of Background Sequences with motif462.3
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTTAATNATTAA
GTTAATNATTAA
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GTTAATNATTAA-
GTTAATGATTAAC
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATNATTAA--
NGTTAATNATTAACN
 A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GTTAATNATTAA
GGTTAAACATTAA
 A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

ATHB-16/MA0951.1/Jaspar

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:GTTAATNATTAA
--TAATAATT--
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T A C G T G A C T C G T A C G T A A C G T T G C A C G T A A C G T C A G T A C G T A C G T

PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GTTAATNATTAA
-RTAATSATTA-
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T T C A G A G C T G T C A C G T A A C G T A T G C C G T A A C G T A C G T C T G A A C G T

ATHB13/MA1212.1/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTTAATNATTAA
-TNAATTATTGA
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T G C A T G A C T G C T A C T G A A C G T C A G T C G T A C G A T A C G T C T A G C T G A

HAHB4(HD-ZIP)/Helianthus anuus/AthaMap

Match Rank:8
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GTTAATNATTAA
--TAATGATTG-
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T A C G T C G A T C G T A C G T A A C G T C T A G C G T A A C G T C A G T T C A G A C G T

ATHB20/MA1209.1/Jaspar

Match Rank:9
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GTTAATNATTAA
-TCAATTATTGN
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T G C A T G A T C C T G A C G T A A C G T G A C T C G T A A C G T A C G T C T A G C T G A

HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GTTAATNATTAA
-CYAATSATTR-
 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A
A C G T G A T C G A T C G C T A G T C A G A C T A T G C T C G A C G A T C G A T C T A G A C G T