Information for HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer (Motif 156)

T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
Reverse Opposite:
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C
p-value:1e-3334
log p-value:-7.677e+03
FDR:NA
Information Content per bp:1.631
Number of Target Sequences with motif3845.0
Percentage of Target Sequences with motif63.19%
Number of Background Sequences with motif2067.7
Percentage of Background Sequences with motif4.94%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:RTTATGYAAB
RTTATGYAAB
 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

HLF/MA0043.3/Jaspar

Match Rank:2
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--RTTATGYAAB--
TTGTTATGCAACAA
 A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

NFIL3/MA0025.2/Jaspar

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTTATGYAAB--
TATTATGCAATAT
 A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

Pdp1/MA1702.1/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTTATGYAAB-
AATTATGCAATT
 A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T
C G T A C T G A C G A T C A G T C T G A G A C T C T A G G A T C T G C A C G T A G A C T G C A T

NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.92
Offset:-5
Orientation:reverse strand
Alignment:-----RTTATGYAAB
NNNNNRTTACGTAAB
 A C G T A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
A G C T T G C A T C G A G A T C C A G T T C G A A C G T A C G T C T G A A G T C C T A G G A C T G T C A C G T A A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:RTTATGYAAB
-TTATGCAAT
 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

DBP/MA0639.1/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-RTTATGYAAB-
NGTTACGTAATN
 A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-RTTATGYAAB-
NGTTACGTAATN
 A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

YAP6(MacIsaac)/Yeast

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:RTTATGYAAB
-TTATGTAA-
 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
A C G T C A G T C G A T T C G A G A C T T C A G G A C T C T G A G T C A A C G T

gt/MA0447.1/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:RTTATGYAAB
ATTACGTAAT
 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C
T C G A A C G T A C G T C T G A A G T C C T A G A G C T G T C A C G T A A G C T