Information for HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer (Motif 155)

A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
Reverse Opposite:
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A
p-value:1e-348
log p-value:-8.032e+02
FDR:NA
Information Content per bp:1.713
Number of Target Sequences with motif712.0
Percentage of Target Sequences with motif17.88%
Number of Background Sequences with motif1203.7
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TWVGGTCCGC
TWVGGTCCGC
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TWVGGTCCGC--
CAACGTCCGCGG
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

RDR1/MA0360.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TWVGGTCCGC-
---GTTCCGCA
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T
A C G T A C G T A C G T A C T G C G A T A C G T A G T C A G T C A C T G A G T C C G T A

NRG1(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TWVGGTCCGC
-AGGGTCC--
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T T C G A C T A G T C A G C A T G G C A T G A T C A G T C A C G T A C G T

TEA1/MA0405.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TWVGGTCCGC
--ATGCCCGC
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T A C G T C T G A G C A T A T C G A G C T A T G C A G T C A C T G G T A C

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TWVGGTCCGC
-AGGGTCC--
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T T G C A A T C G A C T G C T A G G C A T A G T C A G T C A C G T A C G T

HAL9/MA0311.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TWVGGTCCGC
----TTCCG-
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G T C A C T G A C G T

YLL054C/MA0429.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TWVGGTCCGC
--TCGGCCG-
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T A C G T C G A T A G T C A T C G A C T G A G T C A G T C A C T G A C G T

RGT1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TWVGGTCCGC
--TNNTCCG-
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T

nit-4/MA1435.1/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TWVGGTCCGC----
----CTCCGCGGAG
 A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A G C T A G T C A G T C A T C G A G T C A C T G A C T G T C G A A C T G