Information for GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer (Motif 147)

C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
Reverse Opposite:
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T
p-value:1e-2421
log p-value:-5.577e+03
FDR:NA
Information Content per bp:1.541
Number of Target Sequences with motif2291.0
Percentage of Target Sequences with motif39.30%
Number of Background Sequences with motif702.0
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AAACYKGTTWDACMRGTTTB
AAACYKGTTWDACMRGTTTB
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAACYKGTTWDACMRGTTTB
AAACCGGTTT----------
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAACYKGTTWDACMRGTTTB
AAAACCGGTTTT---------
 A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

grh/MA1457.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAACYKGTTWDACMRGTTTB
NNAAACTGGTTTN---------
 A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
T C A G T G C A T C G A C T G A C G T A T A G C G A C T A T C G C A T G G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAACYKGTTWDACMRGTTTB
NAAACCTGTTTN---------
 A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAACYKGTTWDACMRGTTTB
-TMCTTGNNNNNCAAG----
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
A C G T C G A T G T C A A G T C A C G T A C G T A C T G G A C T C G A T A T C G G C T A G T C A A G T C C G T A G T C A A C T G A C G T A C G T A C G T A C G T

AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAACYKGTTWDACMRGTTTB
AAAACCRGWW-----------
 A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
C G T A C G T A C G T A C G T A A G T C A G T C C T A G A T C G C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ANAC050/MA1663.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAACYKGTTWDACMRGTTTB
TTACTTGTNNNACAAG----
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
C G A T C G A T T C G A A G T C A C G T A C G T T C A G G A C T C T A G C G T A G A T C T C G A A T G C C G T A G T C A A C T G A C G T A C G T A C G T A C G T

grh/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAACYKGTTWDACMRGTTTB
CNAACCGGTCCTGCGG-----
 A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
A G C T A C G T C G T A C G T A A G T C A G C T A C T G A C T G A C G T A G C T A G C T A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T

ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACYKGTTWDACMRGTTTB
-TWCTTGTDNNACAAG----
 C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T
A C G T C G A T C G T A A G T C A C G T A C G T T C A G G C A T C G T A G C T A G C T A C G T A A G T C C G T A G T C A A C T G A C G T A C G T A C G T A C G T