Information for FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer (Motif 120)

A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
Reverse Opposite:
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A
p-value:1e-467
log p-value:-1.075e+03
FDR:NA
Information Content per bp:1.676
Number of Target Sequences with motif1304.0
Percentage of Target Sequences with motif29.30%
Number of Background Sequences with motif2923.2
Percentage of Background Sequences with motif6.58%
Average Position of motif in Targets50.2 +/- 26.0bp
Average Position of motif in Background49.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TRTTTACTTW
TRTTTACTTW
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

pha-4/MA0546.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:TRTTTACTTW
TGTTTACTTT
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T G A C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:TRTTTACTTW
TGTTTACTTT
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TRTTTACTTW
TGTTTACTTT
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---TRTTTACTTW--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TRTTTACTTW
TTTGTTTACTTA
 A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTACTTW
ATATTTACATA
 A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TRTTTACTTW
CNTGTTTACATA
 A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXD2/MA0847.2/Jaspar

Match Rank:9
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTACTTW--
TTGTTTACTTAAN
 A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T
C G A T G C A T C T A G G C A T A C G T A C G T C T G A A G T C C G A T A G C T C G T A C T G A A T G C

fkh/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TRTTTACTTW-
TGTTTGCNTAA
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T
C G A T T C A G A G C T A G C T C A G T T C A G G A T C G A C T A G C T C G T A C G T A