Information for Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer (Motif 114)

A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
Reverse Opposite:
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G
p-value:1e-485
log p-value:-1.117e+03
FDR:NA
Information Content per bp:1.558
Number of Target Sequences with motif1311.0
Percentage of Target Sequences with motif24.90%
Number of Background Sequences with motif2133.4
Percentage of Background Sequences with motif5.29%
Average Position of motif in Targets49.2 +/- 23.5bp
Average Position of motif in Background51.4 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
NNNVCTGWGYAAACASN
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:NNNVCTGWGYAAACASN-
---NCWRWGTAAACANSV
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T
A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

pha-4/MA0546.1/Jaspar

Match Rank:3
Score:0.91
Offset:5
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
-----AAAGTAAACA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.90
Offset:5
Orientation:reverse strand
Alignment:NNNVCTGWGYAAACASN
-----TATGTAAACANG
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.90
Offset:5
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
-----AAAGTAAACA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.89
Offset:5
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
-----AAAGTAAACA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.89
Offset:5
Orientation:reverse strand
Alignment:NNNVCTGWGYAAACASN
-----WAAGTAAAYA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

fkh/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.88
Offset:4
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
----TTANGCAAACA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T C G A T G C A T T C G A C G T A C T A G A G T C G T C A C T G A C T G A A G T C C G T A A C G T A C G T

fkh/MA0446.1/Jaspar

Match Rank:9
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:NNNVCTGWGYAAACASN
----TTAAGCAAACA--
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A C T A G A G T C G T C A C G T A C G T A A G T C C G T A A C G T A C G T

FOXA3/MA1683.1/Jaspar

Match Rank:10
Score:0.86
Offset:6
Orientation:forward strand
Alignment:NNNVCTGWGYAAACASN
------ATGTAAACATA
 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A