Information for FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer (Motif 113)

C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
Reverse Opposite:
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A
p-value:1e-121
log p-value:-2.795e+02
FDR:NA
Information Content per bp:1.656
Number of Target Sequences with motif1017.0
Percentage of Target Sequences with motif13.09%
Number of Background Sequences with motif2475.4
Percentage of Background Sequences with motif5.88%
Average Position of motif in Targets49.6 +/- 25.2bp
Average Position of motif in Background49.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGTTTAYTTAGC
TGTTTAYTTAGC
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

FOXD2/MA0847.2/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTAYTTAGC
TTGTTTACTTAAN
 A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
C G A T G C A T C T A G G C A T A C G T A C G T C T G A A G T C C G A T A G C T C G T A C T G A A T G C

FOXE1/MA1487.1/Jaspar

Match Rank:3
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAYTTAGC-
NTTGTTTATTTAAGG
 A C G T A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C A C G T
C T G A G C A T A G C T A C T G A C G T A C G T A C G T C T G A A G C T G C A T A G C T C G T A T C G A A C T G T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TGTTTAYTTAGC
TGTTTATTT---
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGTTTAYTTAGC
TGTTTACTTT--
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAYTTAGC
TTTGTTTACTTA--
 A C G T A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGTTTAYTTAGC
TGTTTACTTT--
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

fkh/MA0446.1/Jaspar

Match Rank:8
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGTTTAYTTAGC
TGTTTGCTTAA-
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
C G A T C T A G A C G T A C G T A C G T C T A G G A T C G A C T A G C T C G T A C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---TGTTTAYTTAGC
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TGTTTAYTTAGC
TRTTTACTTW--
 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T